.. image:: images/pVACsplice_logo_trans-bg_v4b.png
    :align: right
    :alt: pVACsplice logo
    :width: 175px

.. _pvacsplice:

pVACsplice
==========

pVACsplice predicts neoantigens for novel junctions created from tumor-specific alternative splicing patterns.

.. toctree::
   :glob:

   pvacsplice/features
   pvacsplice/input_file_prep
   pvacsplice/getting_started
   pvacsplice/run
   pvacsplice/output_files
   pvacsplice/filter_commands
   pvacsplice/additional_commands
   pvacsplice/optional_downstream_analysis_tools