.. image:: ../images/pVACvector_logo_trans-bg_sm_v4b.png
    :align: right
    :alt: pVACvector logo

Additional Commands
===================

To make using pVACvector easier, several convenience methods are included in the package.

Creating Vector Visualization
-----------------------------

By default, pVACvector will create a visualization of the vector design
result. For this to happen, the DISPLAY environment variable has to be set.
This is often not the case, for example, when running pVACvector on a compute
cluster. We provide this convenience method to create the visualization
graphic from a successful pVACvector result FASTA file on any machine that has
the DISPLAY environment variable set.

.. program-output:: pvacvector visualize -h

.. _pvacvector_example_data:

Download Example Data
---------------------

.. program-output:: pvacvector download_example_data -h