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Frequently Asked Questions
==========================
.. role:: large
.. role:: large-code
:large:`How is pVACtools licensed?`
pVACtools is licensed under `BSD 3-Clause Clear License
`_.
:large:`Where can I get help?`
Bug reports or feature requests can be submitted on the `pVACtools Github page `_. You may also contact us by email at help@pvactools.org.
:large:`How do I cite pVACtools?`
Jasreet Hundal+, Susanna Kiwala+, Joshua McMichael, Christopher A Miller,
Alexander T Wollam, Huiming Xia, Connor J Liu, Sidi Zhao, Yang-Yang Feng,
Aaron P Graubert, Amber Z Wollam, Jonas Neichin, Megan Neveau, Jason Walker,
William E Gillanders, Elaine R Mardis, Obi L Griffith, Malachi Griffith.
`pVACtools: a computational toolkit to select and visualize cancer
neoantigens `_.
bioRxiv 501817; doi: https://doi.org/10.1101/501817. (+)equal contribution.
Jasreet Hundal, Susanna Kiwala, Yang-Yang Feng, Connor J. Liu, Ramaswamy Govindan,
William C. Chapman, Ravindra Uppaluri, S. Joshua Swamidass, Obi L. Griffith, Elaine R. Mardis,
and Malachi Griffith. `Accounting for proximal variants improves neoantigen prediction `_.
Nature Genetics. 2018, DOI: 10.1038/s41588-018-0283-9. PMID: `30510237 `_.
Jasreet Hundal, Beatriz M. Carreno, Allegra A. Petti, Gerald P. Linette, Obi
L. Griffith, Elaine R. Mardis, and Malachi Griffith. `pVACseq: A genome-guided
in silico approach to identifying tumor neoantigens `_. Genome Medicine. 2016,
8:11, DOI: 10.1186/s13073-016-0264-5. PMID: `26825632
`_.