pVACviz

pVACviz is a browser-based, graphical user interface for the pVACtools command line tools. It currently supports starting and managing pVACseq runs as well as visualizing the results of your runs.

• Installation
  • MHCflurry
  • PostgreSQL
• Running pVACviz
• pVACapi Directories
  • /archive
  • /export
  • /input
  • /visualize
  • /.processes
  • /.tmp
• Starting Processes
  • Populating and Submitting the Start Form
  • Notes
• Managing Processes
  • Displaying All Managed Processes
  • Displaying Process Details
  • Process Actions
• Visualizing Processes
  • Visualizing Completed Processes
  • Visualizing pVACseq Results Files
  • Scatterplot Visualization
  • Axis Columns
  • Filters
  • Data Table
  • Exporting Visualization Data
• pVACapi Troubleshotting