pVACbind

This component of the pVACtools is used to predict neoantigens for the peptides in a FASTA file.

• Prerequisites
• Getting Started
• Usage
• Output Files
  • Filters applied to the filtered.tsv file
  • all_epitopes.tsv and filtered.tsv Report Columns
  • filtered.tsv.reference_matches Report Columns
• Filtering Commands
  • Binding Filter
  • Top Score Filter
• Additional Commands
  • Download Example Data
  • List Valid Alleles
  • List Allele-Specific Cutoffs